ZEAMAP Genomics: Gene Functional Annotation
Resource Type | Analysis |
---|---|
Name | ZEAMAP Genomics: Gene Functional Annotation |
Description | For each genome annotation, the protein sequences of the predicted genes were compared against the InterPro database using InterProScan 5 to identify functional protein domains. The proteins were further compared against the GenBank non-redundant protein (nr) database using Basic Local Alignment Search Tool (BLAST) with the options “-p blastp –e 1e-05 –b 5 –v 5 –a 4 –m 7 –F F”. The BLAST results against the nr database and the Interpro results were further analyzed by Blast2GO to assign gene ontology (GO) terms. |
Program, Pipeline, Workflow or Method Name | A set of tools described in Description |
Program Version | n/a |
Date Performed | Monday, March 30, 2020 - 03:44 |
Data Source |